Primers or Probes | Sequence | Gene | Size |
---|---|---|---|
Primer | Â | Â | Â |
JP2-F3 | 5’-TCT ATG AAT ACT GGA AAC TTG TTC AGA AT-3’ | orfX’ | 151 bpd |
JP2-R2 | 5’-GAA TAA GAT AAC CAA ACC ACA ATA TCC-3’ | orfX’ | |
Non-JP2F | 5’-CGC AAG TGC CAT AGT TAT CCA CT-3’ | orfX (∆530 region) | 145 bpe |
Non-JP2R | 5’-TCG TCT GCG TAA TAA GCA AGA GAG-3’ | orfX (∆530 region) | |
Aa orfX3’F1 | 5’-AAA TCG TTG GCA TTC TCG -3’ | orfX | 723 bpe |
Aa lktC5’R1 | 5’-CAA AGG AGA ATT TGC CCA -3’ | lktC | |
Aa orfX3’F2 | 5’-CCG TTT TAT TCA GTT CCC -3’ | orfX | 809 bpe |
Aa lktC5’R2 | 5’-TGC CCA TAA CCA AGC CAC -3’ | lktC | |
Hydrolysis probesa, b, c | Â | Â | Â |
JP2 | 5’-FAM-ACA AAT CGT TGG CAT TCT CGG CGA A-TAMRA-3’ | orfX’ |  |
Non-JP2 | 5’-FAM-ATA TTG TAG ACA TCG CCC-MGB-3’ | orfX (∆530 region) |  |