Sl. no. | Identified E protein domains | Positions wise amino acid substitutions | Types of amino acid substitutionsa | Wild type vaccine strain | WB Isolates | |||
---|---|---|---|---|---|---|---|---|
SA14-14-2 | IND/12/WB/JEV50 | IND/11/WB/JEV47 | IND/11/WB/JEV46 | IND/11/WB/JEV45 | ||||
1 | Domain I | N2H | NC | N | H | H | H | H |
2 | Domain I | N8H | NC | N | . | H | . | . |
3 | Domain I | K138E | NC | K | E | E | E | E |
4 | Domain I | Q158P | C | Q | P | . | . | . |
5 | Domain I | V176I | C | V | I | I | I | I |
6 | Domain I | A177T | NC | A | T | T | T | T |
7 | Domain II | S64T | C | S | . | T | . | . |
8 | Domain II | N103K | NC | N | . | . | . | K |
9 | Domain II | F107L | NC | F | L | L | L | L |
10 | Domain II | S123R | NC | S | . | R | . | . |
11 | Domain II | A222S | NC | A | . | . | . | S |
12 | Domain II | G244E | NC | G | E | E | E | E |
13 | Domain II | G261S | NC | G | S | S | S | S |
14 | Domain II | H264Q | NC | H | . | Q | Q | Q |
15 | Domain II | M279K | NC | M | K | K | K | K |
16 | Domain III | E306G | NC | E | . | G | G | . |
17 | Domain III | A311R | NC | A | . | . | R | . |
18 | Domain III | V315A | C | V | . | A | A | A |
19 | Domain III | S327Q/T | C | S | . | Q | T | T |
20 | Domain III | S329T | C | S | . | T | T | . |
21 | Domain III | S331K | NC | S | . | K | . | . |
22 | Domain III | A366S | NC | A | . | S | S | . |
23 | Domain III | V372L | C | V | . | . | . | L |
24 | Domain III | M374I | C | M | . | . | . | I |
25 | Domain III | G388E | NC | G | . | E | . | K |
26 | Domain III | D389E | C | D | . | . | E | . |
27 | Domain III | W396R | NC | W | . | . | . | R |
28 | Stem | R416K | C | R | K | K | . | . |
29 | Stem | G432R | NC | G | . | R | . | . |
30 | Stem | R439K | C | R | . | K | K | K |
31 | Transmembrane | L463R | NC | L | . | . | R | . |
32 | Transmembrane | L467E | NC | L | . | E | . | . |
33 | Transmembrane | A481D | NC | A | . | D | . | . |