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Table 1 List of primers used for PCR amplification and DNA sequencing

From: Analysis of mutations in the E6 oncogene of human papillomavirus 16 in cervical cancer isolates from Moroccan women

 

Primer

Fragment generated size

Sequence

Tm (°C)

β-globin

PC04

268 bp

5′-CAACTTCATCCACGTTCACC-3′

54.5

GH20

5′-GAAGAGCCAAGGACAGGTAC-3′

HPV detection & genotyping

MY09

450 bp

5′-CGT CCM ARR GGA WAC TGATC- 3′

55

MY11

5′-GCM CAG GGW CAT AAY AAT GG-3′

GP5+

150 pb

5′-TTTGTTACTGTGGTAGATACTAC-3′

55

GP6+

5′-CTTATACTAAATGTCAAATAAAAA-3′

HPV16 E6 variants

F

524 bp

5′-CGAAACCGGTTAGTATAA-3′

55

R

5′-GTATCTCCATGCATGATT-3′

  1. F: Forward primer; R: Reverse primer