Table 2 Speciation of clinical and environmental Fusarium isolates collected in a Brazilain hospital
Species ID (EF-1αIdentity match%) | Isolate number | Collection date | Sample type | Isolate source |
|---|---|---|---|---|
FSSC† (99.3) | B8586 | 12/10/2005 | Clinical | HP01, blood |
FSSC† (100) | B8659 | 10/16/2007 | Clinical | DP33, skin scraping |
FSSC† (99.1) | B8684 | 7/13/2009 | Clinical | DP58, nail scraping |
FSSC† (99.6) | B8685 | 7/31/2009 | Clinical | DP60, skin scraping |
FSSC 1-a | B8648 | 7/16/2007 | Clinical | DP26, nail scraping |
FSSC 1-a | B8593 | 7/19/2006 | Clinical | HP03, lesion swab |
FSSC 1-a | B8710 | 7/31/2007 | Environmental | BR06, shower swab |
FSSC 1-a | B8711 | 7/31/2007 | Environmental | BR06, shower swab |
FSSC 1-a | B8712 | 7/31/2007 | Environmental | BR06, wall swab |
FSSC 1-a | B8714 | 7/31/2007 | Environmental | BR06, wall swab |
FSSC 1-a | B8715 | 7/31/2007 | Environmental | BR06, wall swab |
FSSC 1-a | B8716 | 7/31/2007 | Environmental | BR06, wall swab |
FSSC 1-a | B8720 | 8/14/2007 | Environmental | BR07, shower swab |
FSSC 1-a | B8721 | 8/14/2007 | Environmental | BR07, shower swab |
FSSC 1-a | B8690 | 9/21/2006 | Environmental | BR10, wall swab |
FSSC 1-a | B8694 | 10/5/2006 | Environmental | BR11, floor swab |
FSSC 1-a | B8741 | 10/25/2007 | Environmental | BR12, shower swab |
FSSC 1-a | B8696 | 11/1/2006 | Environmental | BR03, air |
FSSC 1-b | B8589 | 4/17/2006 | Clinical | HP02, blood |
FSSC 1-b | B8590 | 4/17/2006 | Clinical | HP02, blood |
FSSC 1-b | B8591 | 4/20/2006 | Clinical | HP02, skin biopsy |
FSSC 1-b | B8700 | 11/1/2006 | Environmental | BR03, floor swab |
FSSC 1-b | B8717 | 7/31/2007 | Environmental | BR06, wall swab |
FSSC 1-b | B8728 | 8/31/2007 | Environmental | BR03, sink swab |
FSSC 1-b | B8744 | 10/26/2007 | Environmental | BR01, water |
FSSC 1-b | B8745 | 10/26/2007 | Environmental | BR01, water |
FSSC 1-b | B8662 | 10/31/2007 | Clinical | DP36, nail scraping |
FSSC 1-b | B8681 | 5/20/2009 | Clinical | DP55, skin scraping |
FSSC 1-b | B8757 | 7/6/2009 | Environmental | BR03, shower swab |
FSSC 1-b | B8760 | 7/6/2009 | Environmental | BR03, air |
FSSC 1-b | B8637 | 7/28/2009 | Clinical | HP17, biopsy |
FSSC 1-b | B8638 | 9/4/2009 | Clinical | HP18, blood |
FSSC 1-b | B8639 | 9/4/2009 | Clinical | HP18, blood |
FSSC 1-b | B8640 | 9/4/2009 | Clinical | HP18, blood |
FSSC 2-d | B8592 | 7/12/2006 | Clinical | HP03, blood |
FSSC 2-d | B8697 | 11/1/2006 | Environmental | BR03, air |
FSSC 2-d | B8601 | 4/10/2007 | Clinical | HP07, skin biopsy |
FSSC 2-d | B8602 | 4/10/2007 | Clinical | HP07, vesicle |
FSSC 2-d | B8643 | 6/14/2007 | Clinical | DP21, nail scraping |
FSSC 2-d | B8603 | 6/18/2007 | Clinical | HP08, blood |
FSSC 2-d | B8604 | 6/18/2007 | Clinical | HP08, blood |
FSSC 2-d | B8605 | 6/18/2007 | Clinical | HP08, blood |
FSSC 2-d | B8606 | 6/18/2007 | Clinical | HP08, skin biopsy |
FSSC 2-d | B8607 | 6/19/2007 | Clinical | HP08, skin swab |
FSSC 2-d | B8608 | 6/21/2007 | Clinical | HP08, sputum |
FSSC 2-d | B8609 | 7/4/2007 | Clinical | HP09, skin biopsy |
FSSC 2-d | B8683 | 7/10/2009 | Clinical | DP57, skin scraping |
FSSC 2-d | B8610 | 7/17/2007 | Clinical | HP09, blood |
FSSC 2-d | B8611 | 7/17/2007 | Clinical | HP09, blood |
FSSC 2-d | B8612 | 7/17/2007 | Clinical | HP09, blood |
FSSC 2-d | B8613 | 7/4/2007 | Clinical | HP09, skin swab |
FSSC 2-d | B8616 | 7/26/2007 | Clinical | HP10, skin scraping |
FSSC 2-d | B8617 | 7/26/2007 | Clinical | HP10, skin scraping |
FSSC 2-d | B8625 | 8/2/2007 | Clinical | HP11, nail scraping |
FSSC 2-d | B8626 | 8/7/2007 | Clinical | HP11, lesion swab |
FSSC 2-d | B8649 | 8/10/2007 | Clinical | DP22, nail scraping |
FSSC 2-d | B8650 | 8/17/2007 | Clinical | DP27, skin scraping |
FSSC 2-d | B8655 | 9/21/2007 | Clinical | DP32, skin scraping |
FSSC 2-d | B8661 | 10/31/2007 | Clinical | DP35, skin scraping |
FSSC 2-d | B8749 | 10/31/2007 | Environmental | BR07, water |
FSSC 2-d | B8750 | 10/31/2007 | Environmental | BR07, water |
FSSC 2-d | B8663 | 1/11/2008 | Clinical | DP37, nail scraping |
FSSC 2-d | B8668 | 4/8/2008 | Clinical | DP42, nail scraping |
FSSC 2-d | B8669 | 4/24/2008 | Clinical | DP43, skin scraping |
FSSC 2-d | B8673 | 9/26/2008 | Clinical | DP47, nail scraping |
FSSC 2-d | B8675 | 10/16/2008 | Clinical | DP49, nail scraping |
FSSC 2-d | B8631 | 12/1/2008 | Clinical | HP14, lesion aspirate |
FSSC 2-d | B8632 | 12/2/2008 | Clinical | HP14, skin biopsy |
FSSC 2-d | B8679 | 2/20/2009 | Clinical | DP53, nail scraping |
FSSC 2-f | B8587 | 12/14/2005 | Clinical | HP01, blood |
FSSC 2-f | B8588 | 12/14/2005 | Clinical | HP01, blood |
FSSC 2-f | B8692 | 9/21/2006 | Environmental | BR10, floor swab |
FSSC 2-f | B8596 | 12/26/2006 | Clinical | HP04, lesion ulcer |
FSSC 2-f | B8597 | 2/4/2007 | Clinical | HP05, blood |
FSSC 2-f | B8598 | 2/4/2007 | Clinical | HP05, blood |
FSSC 2-f | B8599 | 2/5/2007 | Clinical | HP05, skin biopsy |
FSSC 2-f | B8600 | 3/12/2007 | Clinical | HP06, nail scraping |
FSSC 2-f | B8644 | 6/18/2007 | Clinical | DP22, nail scraping |
FSSC 2-f | B8645 | 6/18/2007 | Clinical | DP23, skin scraping |
FSSC 2-f | B8615 | 7/26/2007 | Clinical | HP10, skin swab |
FSSC 2-f | B8651 | 9/6/2007 | Clinical | DP28, nail scraping |
FSSC 2-f | B8657 | 10/4/2007 | Clinical | DP28, nail scraping |
FSSC 2-f | B8666 | 3/7/2008 | Clinical | DP40, nail scraping |
FSSC 2-f | B8671 | 5/14/2008 | Clinical | DP45, nail scraping |
FSSC 2-h | B8665 | 1/22/2008 | Clinical | DP39, nail scraping |
FSSC 2-i | B8646 | 6/26/2007 | Clinical | DP24, nail scraping |
FSSC 2-i | B8653 | 9/21/2007 | Clinical | DP30, nail scraping |
FSSC 2-i | B8670 | 4/28/2008 | Clinical | DP44, nail scraping |
FSSC 2-i | B8678 | 1/26/2009 | Clinical | DP52, nail scraping |
FSSC 2-i | B8688 | 10/6/2009 | Clinical | DP63, nail scraping |
FSSC 2-i | B8687 | 10/8/2009 | Clinical | DP62, skin scraping |
FSSC 2-k | B8642 | 6/5/2007 | Clinical | DP20, skin scraping |
FSSC 2-k | B8647 | 7/2/2007 | Clinical | DP25, nail scraping |
FSSC 2-k | B8614 | 7/26/2007 | Clinical | HP10, skin swab |
FSSC 2-k | B8618 | 9/5/2007 | Clinical | HP10, sinovial fluid |
FSSC 2-k | B8619 | 9/5/2007 | Clinical | HP10, sinovial fluid |
FSSC 2-k | B8620 | 9/10/2007 | Clinical | HP10, sinovial fluid |
FSSC 2-k | B8621 | 9/10/2007 | Clinical | HP10, sinovial fluid |
FSSC 2-k | B8654 | 9/21/2007 | Clinical | DP31, skin scraping |
FSSC 2-k | B8656 | 9/24/2007 | Clinical | DP23, nail scraping |
FSSC 2-k | B8622 | 10/8/2007 | Clinical | HP10, sinovial fluid |
FSSC 2-k | B8623 | 10/9/2007 | Clinical | HP10, sinovial fluid |
FSSC 2-k | B8624 | 10/11/2007 | Clinical | HP10, sinovial fluid |
FSSC 2-t | B8594 | 7/19/2006 | Clinical | HP03, lesion swab |
FSSC 2-t | B8595 | 7/19/2006 | Clinical | HP03, lesion swab |
FSSC 2-t | B8658 | 10/16/2007 | Clinical | DP33, skin scraping |
FSSC 2-u | B8652 | 9/17/2007 | Clinical | DP29, nail scraping |
FSSC 2-u | B8674 | 10/13/2008 | Clinical | DP48, nail scraping |
FSSC 3+4 (100) | B8677 | 12/19/2008 | Clinical | DP51, skin scraping |
FSSC 3+4 (100) | B8636 | 1/29/2009 | Clinical | HP16, corneal ulcer swab |
FSSC 5 (99.5) | B8676 | 10/17/2008 | Clinical | DP50, nail scraping |
FSSC 7 (99.7) | B8634 | 1/5/2008 | Clinical | HP15, blood |
FSSC 7 (99.7) | B8635 | 1/5/2008 | Clinical | HP15, blood |
FOSC† (100) | B8698 | 11/1/2006 | Environmental | BR03, shower swab |
FOSC† (100) | B8660 | 10/26/2007 | Clinical | DP34, skin scraping |
FOSC† (99.7) | B8667 | 3/27/2008 | Clinical | DP41, nail scraping |
FOSC† (100) | B8672 | 8/18/2008 | Clinical | DP46, nail scraping |
FOSC† (99.9) | B8633 | 12/18/2008 | Clinical | HP15, skin scraping |
FOSC 33 (100) | B8699 | 11/1/2006 | Environmental | BR03, wall swab |
FOSC 33 (100) | B8701 | 11/1/2006 | Environmental | BR03, sink swab |
FOSC 33 (100) | B8702 | 11/1/2006 | Environmental | BR03, sink swab |
FOSC 33 (100) | B8691 | 9/21/2006 | Environmental | BR10, sink swab |
FOSC 33 (100) | B8695 | 10/5/2006 | Environmental | BR11, sink swab |
FOSC 33 (100) | B8713 | 7/31/2007 | Environmental | BR06, wall swab |
FOSC 33 (100) | B8719 | 8/14/2007 | Environmental | BR04, sink swab |
FOSC 33 (100) | B8722 | 8/15/2007 | Environmental | Nephrology, wall swab |
FOSC 33 (100) | B8723 | 8/27/2007 | Environmental | BR01, sink swab |
FOSC 33 (100) | B8724 | 8/27/2007 | Environmental | BR01, faucet swab |
FOSC 33 (100) | B8726 | 8/27/2007 | Environmental | BR02, sink swab |
FOSC 33 (100) | B8727 | 8/27/2007 | Environmental | BR02, water |
FOSC 33 (100) | B8729 | 8/31/2007 | Environmental | BR05, sink swab |
FOSC 33 (100) | B8730 | 8/31/2007 | Environmental | BR05, sink swab |
FOSC 33 (100) | B8731 | 10/16/2007 | Environmental | BR08, sink swab |
FOSC 33 (100) | B8732 | 10/16/2007 | Environmental | BR08, sink swab |
FOSC 33 (100) | B8733 | 10/19/2007 | Environmental | BR09, shower swab |
FOSC 33 (100) | B8734 | 10/19/2007 | Environmental | BR09, shower swab |
FOSC 33 (100) | B8735 | 10/19/2007 | Environmental | BR09, shower swab |
FOSC 33 (100) | B8736 | 10/19/2007 | Environmental | BR09, wall swab |
FOSC 33 (100) | B8737 | 10/19/2007 | Environmental | BR09, sink swab |
FOSC 33 (100) | B8739 | 10/23/2007 | Environmental | BR10, sink swab |
FOSC 33 (100) | B8740 | 10/23/2007 | Environmental | BR11, wall swab |
FOSC 33 (100) | B8629 | 10/24/2008 | Clinical | HP13, blood |
FOSC 33 (100) | B8742 | 10/25/2007 | Environmental | BR12, sink swab |
FOSC 33 (100) | B8743 | 10/25/2007 | Environmental | BR12, shower swab |
FOSC 33 (100) | B8746 | 10/26/2007 | Environmental | BR01, water |
FOSC 33 (100) | B8747 | 10/26/2007 | Environmental | BR02, water |
FOSC 33 (100) | B8748 | 10/26/2007 | Environmental | BR02, water |
FOSC 33 (100) | B8630 | 10/30/2008 | Clinical | HP13, catheter tip |
FOSC 33 (100) | B8752 | 10/31/2007 | Environmental | BR07, water |
FOSC 33 (100) | B8756 | 7/6/2009 | Environmental | BR06, sink swab |
FOSC 33 (100) | B8758 | 7/6/2009 | Environmental | BR03, sink swab |
FOSC 33 (100) | B8762 | 7/27/2009 | Environmental | BR06, sink swab |
FOSC 183 (100) | B8751 | 10/31/2007 | Environmental | BR02, water |
FIESC† (98) | B8709 | 8/7/2007 | Environmental | BR04, air |
FIESC 15 (100) | B8689 | 6/30/2005 | Environmental | BR06, air |
FIESC 15 (100) | B8703 | 1/29/2007 | Environmental | ICU, air (control) |
FIESC 15 (100) | B8704 | 1/29/2007 | Environmental | ICU, air (control) |
FIESC 15 (100) | B8705 | 6/13/2007 | Environmental | ICU, air (control) |
FIESC 15 (99.5) | B8706 | 6/13/2007 | Environmental | ICU, air (control) |
FIESC 15 (100) | B8753 | 4/30/2009 | Environmental | ICU, air (control) |
FIESC 15 (100) | B8755 | 4/30/2009 | Environmental | ICU, air (control) |
FIESC 17 (100) | B8708 | 6/18/2007 | Environmental | Pediatrics, air (control) |
FIESC 20 (100) | B8707 | 6/18/2007 | Environmental | Pediatrics, air (control) |
FIESC 20 (100) | B8759 | 7/6/2009 | Environmental | BR03, air |
GFSC (94.1) | B8627 | 4/18/2008 | Clinical | HP12, blood |
GFSC (94.1) | B8628 | 4/18/2008 | Clinical | HP12, blood |