Table 4 Sequence polymorphism of the 9 loci
From: Changes of predominant species/biovars and sequence types of Brucellaisolates, Inner Mongolia, China
Locus | Alleles | Polymorphic sites | Polymorphic sites percent | dN | dS | dN/dS | Mean % GC |
|---|---|---|---|---|---|---|---|
aroA | 6 | 4 | 0.71% | 0.0026 | 0.0058 | 0.4422 | 61.77 |
cobQ | 5 | 4 | 0.95% | 0.0044 | 0.0058 | 0.7678 | 59.43 |
dnak | 2 | 1 | 0.21% | 0 | 0.009 | 0 | 60.53 |
gap | 3 | 3 | 0.51% | 0.0015 | 0.0091 | 0.1668 | 58.35 |
glk | 4 | 4 | 0.84% | 0.0029 | 0.0038 | 0.761 | 62.53 |
gyrB | 5 | 3 | 0.64% | 0.0017 | 0.0102 | 0.1681 | 58.93 |
omp25 | 5 | 4 | 0.82% | 0 | 0.02 | 0 | 59.2 |
trpE | 3 | 2 | 0.41% | 0.0018 | 0.0056 | 0.3239 | 58.44 |
Int-hyp | 3 | 4 | 0.93% | - | - | - | 55.81 |