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Table 2 GeneBank Accession numbers for genes sequenced.

From: Truncation in the tcdC region of the Clostridium difficilePathLoc of clinical isolates does not predict increased biological activity of Toxin B or Toxin A

Strain

accession no. for gene region

 

tcdR

tcdE

tcdC

ATCC 43594

DQ912170

DQ902560

DQ870674

1083

DQ912171

DQ902562*

DQ272240**

79A292

DQ912172

DQ902561

DQ970676

81A330

DQ912173

n.d.a

DQ870675

57A

DQ912174

DQ902559

DQ272239

83

DQ912175

n.d.a

n.d.a

  1. an.d., not deposited as the sequence for this region was 100% identical to the same region from strain 57A.
  2. * The 1 bp deletion is at position 272 of the DQ902562 gene sequence. The deletion causes a frameshift resulting in an in-frame stop codon at position 275–277 of the DQ902562 sequence.
  3. ** The 1 bp substitution that results in a transversion of C to A is at position 695 of the DQ272240 sequence.