Figure 2

Networks of genes upregulated on spore-infected cells as determined by Ingenuity analysis. Genes depicted in gray were identified by the microarray results as differentially expressed. Genes depicted in white are inferred genes. These are genes that should be differentially expressed on the basis of Ingenuity analysis, and although they were expressed, differential expression was not identified by statistical analysis of the microarray results. A) First network, B) Second network, C) Third network. Genes that are not expressed under any conditions were removed from the networks.