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Table 1 Distribution of the Mycobacterium tuberculosis complex isolates identified in Palermo, Italy, in the years 2004-2012 by lineage, family/sub-family and geographic source of patients

From: Molecular epidemiology of tuberculosis in Sicily, Italy: what has changed after a decade?

   

No. of isolates

Lineage

nr. of isolates

Family/sub-family

Italian-born

Foreign-born

Haarlem

47

H3

15

13

  

H1

5

6

  

H

1

5

  

H3 variant

-

2

T

34

T1

12

9

  

T3

3

1

  

T

5

-

  

T2

2

-

  

T2-T3

1

-

  

T5

1

-

LAM

24

LAM 9

10

4

  

LAM 5

2

1

  

LAM 1

1

1

  

LAM variant

1

1

  

LAM 3

1

-

  

LAM 4

1

-

  

LAM

1

-

S

15

S

15

-

CAM

14

CAM

8

3

  

CAM variant

-

3

U

13

U

10

3

EAI

10

EAI2 Manilla

3

-

  

EAI3 India

1

2

  

EAI6 BGD1

-

2

  

EAI1 SOM

-

1

  

EAI5

-

1

CAS

6

CAS 1Delhi

-

3

  

CAS 1Delhi variant

1

2

Turkish

5

Turkish variant

-

3

  

Turkish

-

2

X

4

X1

1

1

  

X2

1

-

  

X3

1

-

Bovis

4

Bovis BCG

2

-

  

Bovis

1

-

  

Bovis 1

1

-

Ural

1

Ural 1

1

-