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Table 2 Phenotypic and molecular results from whole blood samples and paired BC bottles

From: Diagnosis of bacteremia in pediatric oncologic patients by in-house real-time PCR

BC Sample (BACTEC) Whole blood sample (EDTA) Specie isolated from BC bottle (Phoenix®) Susceptibility profile (Phoenix®) qPCR from BC bottles for resistance genes (ct) qPCR from whole blood for resistance genes (ct)
195 176 S. aureus Oxacillin S mecA (21,855) mecA (33,021)
178 117 a a ND mecA (34,520)
190 152 E. coli Carbapenem S ND ND
191 174 P. aeruginosa Carbapenem S ND ND
283 133 E. cloacae Carbapenem S ND ND
391 255 P. putida Carbapenem S ND ND
404 232 Enterococcus sp Vancomicyn S ND ND
341 233 S. aureus Oxacillin R mecA (28,550) mecA (31,653)
371 240 B. cepacia Carbapenem S ND ND
400 252 B. cepacia Carbapenem S ND ND
477 288 S. epidermidis Oxacillin R mecA (23,914) mecA (33,211)
389 237 E. coli Carbapenem S ND ND
369 244 SCoN Oxacillin S ND mecA (33,073)
372 247 P. aeruginosa Carbapenem S ND ND
373 254 S. epidermidis Oxacillin R mecA (15,683) mecA (29,909)
392 241 S. haemolyticus Oxacillin R mecA (20,648) mecA (37,468)
431 276 SCoN Oxacillin R mecA (15,902) mecA (37,320)
465 293 P. aeruginosa Carbapenem R ND ND
441 273 S. epidermidis Oxacillin R ND ND
422 264 S. aureus Oxacillin R mecA (16,508) mecA (35,945)
423 265 SCoN Oxacillin R mecA (15,513) mecA (36,217)
470 290 E. faecium Vancomicyn R vanA (17,560) vanA (24,938)
  1. BC Bloodculture bottle, ct cycle threshold, R resistant, S Susceptible, ND Not detected
  2. aNegative sample at Phenotypic tests