SNPs | Frequency; N (%) | P value | OR (95% CI) | ||
---|---|---|---|---|---|
Asymptomatic | CCL | ||||
TNFα-308 | |||||
Genotype | AA | 1 (4) | 0 (0) | 0.45 b | 0 (0–0) |
GG | 20 (71) | 29 (85) | 0.06 a | 0.39 (0.14–1.05) | |
GA | 7 (25) | 5 (15) | 0.30 a | 1.93 (0.54–0.94) | |
Allele | A | 9 (16) | 5 (7) | 0.13 a | 2.41 (0.76–7.67) |
G | 47 (87) | 63 (93) | 0.13 a | 0.41 (0.13–1.32) | |
MAF | 0.161 | 0.074 | 0.126 a | ||
IL-10-819 | |||||
Genotype | CC | 6 (27) | 11 (34) | 0.21 a | 0.49 (0.16–1.51) |
TT | 9 (41) | 16 (50) | 0.51 a | 0.69 (0.23–2.07) | |
CT | 7 (32) | 5 (16) | 0.16 a | 2.52 (0.68–9.33) | |
Allele | C | 19 (43) | 27 (42) | 0.92 a | 1.04 (0.48–2.26) |
T | 25 (57) | 37 (58) | 0.92 a | 0.96 (0.44–2.09) | |
MAF | 0.568 | 0.578 | 0.918 a | ||
TLR4 Asp299Gly | |||||
Genotype | AA | 28 (85) | 28 (85) | 0.45 b | 1.25 (0.38–4.22) |
GG | 0 (0) | 0 (0) | – | – | |
AG | 5 (15) | 5 (15) | 0.63 b | 1.00 (0.20–4.88) | |
Allele | A | 61 (92) | 61 (92) | 0.63 b | 1.00 (0.22–4.58) |
G | 5 (8) | 5 (8) | 0.63 b | 1.00 (0.22–4.58) | |
MAF | 0.076 | 0.076 | 1.000 a | ||
TLR4 Thr399Ile | |||||
Genotype | CC | 34 (100) | 34 (100) | – | – |
TT | 0 (0) | 0 (0) | – | – | |
CT | 0 (0) | 0 (0) | – | – | |
Allele | C | 68 (100) | 68 (100) | – | – |
T | – | – | – | – | |
MAF | 0.000 | 0.000 | – |