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Table 1 Assignment of VZV sequences to clades based on single nucleotide polymorphisms within ORF 22 and ORF 62 [13]. Only one example per nucleotide pattern and location is shown, the total number is given in brackets behind the strain name; na = not available;? = could not be attributed; European Nucleotide Archive accession numbers: LT984492- LT984535

From: Varicella zoster and fever rash surveillance in Lao People’s Democratic Republic

Strain

ORF 22

ORF 62

Clade

37,902

38,055

38,081

38,177

107,136

107,165

VZVs/Houitone.LAO/53.14/V[2] (n = 3)

G

C

C

A

T

T

2

VZVs/Vientiane.LAO/3.15/V[5] (n = 2)

A

T

C

G

T

T

5

VZVs/Vientiane.LAO/6.15/V[2] (n = 14)

G

C

C

na

T

T

2

VZVs/Vientiane.LAO/7.15/V[2]

G

C

C

A

T

T

2

VZVs/Vientiane.LAO/7.15/V (n = 2)

A

Y

C

R

T

T

?