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Table 3 Top 20 pathways by KEGG pathway analysis in 3 cohorts

From: Bioinformatics analysis on multiple Gene Expression Omnibus datasets of the hepatitis B virus infection and its response to the interferon-alpha therapy

Rank

Cohort 1

Cohort 2

Cohort 3

1

Chemokine signaling pathway

Chemokine signaling pathway

PI3K-Akt signaling pathway

2

Cytokine-cytokine receptor interaction

Cytokine-cytokine receptor interaction

Influenza A

3

Focal adhesion

Focal adhesion

Metabolic pathways

4

PI3K-Akt signaling pathway

PI3K-Akt signaling pathway

Cytokine-cytokine receptor interaction

5

HTLV-I infection

HTLV-I infection

Chemokine signaling pathway

6

Metabolic pathways

Metabolic pathways

HTLV-I infection

7

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Herpes simplex infection

8

Cell adhesion molecules (CAMs)

ECM-receptor interaction

Toxoplasmosis

9

p53 signaling pathway

p53 signaling pathway

Hematopoietic cell lineage

10

Rheumatoid arthritis

Amoebiasis

Protein processing in endoplasmic reticulum

11

Viral carcinogenesis

Proteoglycans in cancer

NF-kappa B signaling pathway

12

Amoebiasis

Viral carcinogenesis

Insulin signaling pathway

13

Protein digestion and absorption

Rheumatoid arthritis

Leukocyte transendothelial migration

14

Proteoglycans in cancer

Influenza A

Focal adhesion

15

NF-kappa B signaling pathway

Protein digestion and absorption

Phagosome

16

Cell cycle

Hepatitis B

Measles

17

Pathways in cancer

NF-kappa B signaling pathway

Adipocytokine signaling pathway

18

Toll-like receptor signaling pathway

Fc gamma R-mediated phagocytosis

Antigen processing and presentation

19

Influenza A

Cell cycle

Adherens junction

20

Hepatitis B

Malaria

Leishmaniasis

  1. KEGG Kyoto Encyclopedia of Genes and Genomes