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Table 2 Sequence profiling of CCR5 receptor protein

From: Cysteine-cysteine chemokine receptor 5 (CCR5) profile of HIV-infected subjects attending University of Calabar Teaching Hospital, Calabar, Southern Nigeria

SEQ Name

Protein sequence

1_R5F_H10_22

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

2_R5F_A11_02

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

3_R5F_B11_05

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

5_R5-F_D05_11

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

7_R5-F_F05_17

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

8_R5-F_G05_20

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

9_R5-F_H05_23

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

10_R5-F_A06_03

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

11_R5-F_B06_06

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

12_R5-F_C06_09

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

13_R5-F_D06_12

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

14_R5-F_E06_15

FWKNFQTLKI

VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

15_R5-F_F06_18

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

16_R5-F_G06_21

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

17_R5-F_H06_24

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

18_R5-F_A07_01

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

19_R5-F_B07_04

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

20_R5-F_C07_07

FWKNFQTLKI VILGLVLPLL VMVICYSGIL KTLLRCRNEK KRHR

Code

Name

Ratio

Code

Name

Ratio

F

Phenylalanine

2 (4.5%)

I

Isoleucine

4 (9.1%)

W

Tryptophan

1 (2.3%)

V

Valine

3 (6.4%)

K

Lysine

5 (11.4%)

C

Cysteine

2 (4.5%)

N

Asparagine

2 (4.5%)

S

Serine

1 (2.3%)

Q

Glutamine

1 (2.3%)

R

Arginine

4 (9.1%)

T

Threonine

1 (2.3%)

H

Histidine

1 (2.3%)

L

Leucine

7 (15.9%)

P

Proline

1 (2.3%)

M

Methionine

1 (2.3%)

E

Glutamate

1 (2.3%)

G

Glycine

1 (2.3%)

   

Y

Tyrosine

1 (2.3%)