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Table 2 Sequences of the primers and probes used for the RAA assay

From: Use of a rapid recombinase-aided amplification assay for Mycoplasma pneumoniae detection

Primer/probe

Sequence (5′-3′)

Genomic position

Product size (bp)

F-primer

CTTTAACAATAACCGCTGGTTTGAATATGTA

182,540–182,570

164 bp

R-primer

CTACTAAGTTCAGGTTGCTTTCAAGTTCAT

182,703–182,674

164 bp

Probe

TTGCTGGCGCTAAGTTCGTTGGTAGGGAAC [FAM-dT] C [THF] T [BHQ-dT] TTAGCGGGTACCATTA [3′-block]

182,584–182,634

164 bp

  1. FAM 6-carboxyfluorescein, THF Tetrahydrofuran, BHQ Black hole quencher, C3-spacer 3′-phosphate blocker