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Table 3 The functions of 14 hub genes

From: Gene network in pulmonary tuberculosis based on bioinformatic analysis

Gene

Scorea

Full name

Functionb

CD163

12

Scavenger receptor cysteine-rich type 1 protein M130

Acute phase-regulated receptor involved in clearance and endocytosis of hemoglobin/haptoglobin complexes by macrophages and may thereby protect tissues from free hemoglobin-mediated oxidative damage.

TLR5

11.02941

Toll-like receptor 5

Participates in the innate immune response to microbial agents.

IFIT1

10.82353

Interferon-induced protein with tetratricopeptide repeats 1

Interferon-induced antiviral RNA-binding protein that specifically binds single-stranded RNA bearing a 5′-triphosphate group (PPP-RNA), thereby acting as a sensor of viral single- stranded RNAs and inhibiting expression of viral messenger RNAs.

IFIT2

10.82353

Interferon-induced protein with tetratricopeptide repeats 2

IFN-induced antiviral protein which inhibits expression of viral messenger RNAs lacking 2′-O-methylation of the 5′ cap.

CCR7

10.7451

C-C chemokine receptor type 7

Receptor for the MIP-3-beta chemokine. Belongs to the G-protein coupled receptor 1 family.

CXCR3

11.2

C-X-C chemokine receptor type 3

Isoform 1- Receptor for the C-X-C chemokine CXCL9, CXCL10 and CXCL11 and mediates the proliferation, survival and angiogenic activity of human mesangial cells (HMC) through a heterotrimeric G-protein signaling pathway.

TLR1

10.7451

Toll-like receptor 1

Participates in the innate immune response to microbial agents. Specifically recognizes diacylated and triacylated lipopeptides.

FCGR2A

10.63736

Low affinity immunoglobulin gamma Fc region receptor II-a

Binds to the Fc region of immunoglobulins gamma.

CD19

10.7451

B-lymphocyte antigen CD19

Assembles with the antigen receptor of B-lymphocytes in order to decrease the threshold for antigen receptor-dependent stimulation.

IFIH1

10.82353

Interferon-induced helicase C domain-containing protein 1

Innate immune receptor which acts as a cytoplasmic sensor of viral nucleic acids and plays a major role in sensing viral infection and in the activation of a cascade of antiviral responses including the induction of type I interferons and proinflammatory cytokines.

IFI44L

10.82353

Interferon-induced protein 44-like

Exhibits a low antiviral activity against hepatitis C virus.

TLR8

10.7451

Toll-like receptor 8

Key component of innate and adaptive immunity.

IFI44

10.82353

Interferon-induced protein 44

This protein aggregates to form microtubular structures.

TLR2

10.7451

Toll-like receptor 2

Cooperates with LY96 to mediate the innate immune response to bacterial lipoproteins and other microbial cell wall components.

  1. Scorea: indicated MCODE score. Functionb: obtained from NCBI (https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/)