Number of isolates and corresponding FASTQ files | Virulence gene of interest | Predicted genotype by 1928 platform and INH | Discordant across methods (n [%]) | |||
---|---|---|---|---|---|---|
AAa | PPb | AP | PA | |||
255 | etA | 251 | 2 | 0 | 2 | 2 [0.8] |
255 | etB | 253 | 0 | 0 | 2 | 2 [0.8] |
255 | lukF-PVL | 248 | 7 | 0 | 0 | 0 [0] |
255 | lukS-PVL | 248 | 7 | 0 | 0 | 0 [0] |
255 | tsst1 | 215 | 36 | 0 | 4 | 4 [1.6] |
Total (% of 1275) | Â | 1215 (95.3) | 52 (4.1) | 0 (0.0) | 8 (6.3) | 8 (6.3) |