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Table 1 Regional distribution of spoligotype lineage by origin of the patient

From: Tuberculosis in Sudan: a study of Mycobacterium tuberculosis strain genotype and susceptibility to anti-tuberculosis drugs

Lineage

Number (%) of isolates by region.

 

Central

East

North

South

West

All

CAS1_Delhi*

10 (45.5)

24 (45.3)

9 (40.9)

10 (38.5)

73 (67)

126 (53.9)

T1

1 (4.5)

8 (15.1)

2 (9.1)

1 (3.9)

4 (3.7)

16 (6.9)

Beijing/W

1 (4.5)

1 (1.9)

1 (4.5)

0

4 (3.7)

7 (3.0)

H3

1 (4.5)

1 (1.9)

0

1 (3.9)

4 (3.7)

7 (3.0)

CAS

1 (4.5)

1 (1.9)

0

0

2 (1.8)

4 (1.7)

LAM7_TUR

1 (4.5)

2 (3.8)

0

0

0

3 (1.3)

U

0

3 (5.7)

0

0

0

3 (1.3)

T2

0

0

0

0

3 (2.8)

3 (1.3)

S

0

1 (1.9)

0

0

0

1 (0.4)

LAM9

0

1 (1.9)

0

0

1 (0.9)

2 (0.9)

No SIT

7 (31.8)

11 (20.8)

10 (45.5)

14 (53.9)

18 (16.51)

60 (26.3)

  1. *Includes 114 CAS1_Delhi isolates matching SIT patterns 24, 25, 141, 232, 247, 309, 381, 1198, 1203 or 1787 and an additional 12 strains having spoligotype patterns one spacer different to SIT25.